======CIS Spring 2016 Projects====== **NOTE:** The text below is left over from Spring 2016. It will need editing before the page is made public =====Project Ideas===== Here is a PDF file of {{:courses:446:2016:2016_possible_projects_consolidated_.pdf|some possible projects for 2016}}, and here is {{:courses:446:2016:2016_possible_projects_list.pptx.pdf|a PDF file just listing the names and mentors of the projects}}. These will be presented in class over the first few sessions of class. Remember several points, however: * This list is not necessarily complete. More will be added. * You are ultimately responsible for finding and proposing a project. * You must get agreement from your mentors that your proposed project is one for which you are appropriate. * Your project does not have to be one of the ones in this suggested list. However, if it is not one of these, you should also get my agreement that it is appropriate for the course. =====Instructions to 446 Students===== The links below point to the Wiki pages for your projects. You should follow the link. This will bring you to a project home page that you can edit once you log in. The two little gear symbols on the upper right give access to functions like login, logout, edit page, etc. The login/logout is on the leftmost gear. Note that there are many styles of Wiki, with different syntax. This one is "dokuwiki". There is a link to help pages from the edit page. The current default access settings are "read" for the CiiS lab, no access to members of the general public, and full power to members of your group. If you want to restrict read access to smaller group (e.g., all 446 students, etc.) contact Prof. Taylor. Prof. Taylor can also implement access control for individual pages if you so desire. If you want the whole world to be able to read your project pages, that can be arranged. Do **not** post anything to unprotected pages that you want kept private until you have arranged with Prof. Taylor to protect them. Also, verify that each member of your group can log in. If you have trouble, contact Prof. Taylor via email providing correct name and JHED id. Finally, if you want to give other individuals (e.g., your mentors) access to your project pages, provide name and JHED id to Prof. Taylor **NOTE:** At the end of the semester, all projects will be made readable to the general public, unless you make arrangements otherwise with Prof. Taylor =====Nondisclosure agreement for in-class discussion===== As we discussed in class, some of the projects may contain potentially patentable material or other material that should not be disclosed publicly until a later time. In order to permit free in-class discussion of this material, we have developed a non-disclosure agreement. When asked, the entire class agreed to sign such an agreement, a copy of which is linked below. * {{:courses:446:2016:2016_nda_for_in-class_discussions.pdf|Here is a link to current year's agreement}}. * If **any** member of the class has any reservations about this, please inform us immediately. * Also, class members are reminded to identify potentially confidential material on any slides or other presentation material used in class =====Project 01: High Precision Drill/Needle Placement with UR5===== **Team Members:** Vignesh Ramchandran, Thomas Yi\\ **Mentors:** Jeff Siewerdsen, Ali Uneri\\ **Project Pages:** [[:courses:446:2016:446-2016-01:Project 01 Main page | Project 01 Main Page]] =====Project 02: Synthetic Tracked Aperture Ultrasound Imaging===== **Team Members:** Kalyna Apkarian, Rodolfo Finocchi\\ **Mentors:** Emad Boctor, Kai Zhang, Russell Taylor\\ **Project Pages:** [[:courses:446:2016:446-2016-02:Project 02 Main page | Project 02 Main Page]] =====Project 03: Realtime Feedback Tool for Nasal Surgery===== **Team Members:** Michael Norris, Felix Jonathan\\ **Mentors:** Narges Ahmidi, Lisa Ishii, Masaru Ishii\\ **Project Pages:** [[:courses:446:2016:446-2016-03:Project 03 Main page | Project 03 Main Page]] =====Project 04: Cone Beam CT Brain Perfusion Sensing and Digital Simulators===== **Team Members:** Michael Mow, Karthik Chellamuthu\\ **Mentors:** Jeff Siewerdsen\\ **Project Pages:** [[:courses:446:2016:446-2016-04:Project 04 Main Page | Project 04 Main Page]] =====Project 05: Smart X-Ray C-Arm Positioning===== **Team Members:** Seung Wook Lee, Ju Young Ahn\\ **Mentors:** Jeff Siewerdsen\\ **Project Pages:** [[:courses:446:2016:446-2016-05:Project 05 Main Page | Project 05 Main Page]] =====Project 06: Augmented Reality for Orthopedic and Trauma Surgeries===== **Team Members:** Dan Adler, Tiffany Chung\\ **Mentors:** Bernhard Fuerst, Nassir Navab\\ **Project Pages:** [[:courses:446:2016:446-2016-06:Project 06 Main Page | Project 06 Main Page]] =====Project 07: Cognitive Training Quiz Application===== **Team Members:** Ran Liu, Nick Uebele\\ **Mentors:** Gorkem Sevinc\\ **Project Pages:** [[:courses:446:2016:446-2016-07:Project 07 Main Page | Project 07 Main Page]] =====Project 08: iPASS: Photoacoustic Catheter Tracking===== **Team Members:** Yuttana Itsarachaiyot\\ **Mentors:** Alexis Cheng, Younsu Kim, Emad Boctor, Russell Taylor\\ **Project Pages:** [[:courses:446:2016:446-2016-08:Project 08 Main Page| Project 08 Main Page]] =====Project 09: Eye-in-Hand Range Image Registration for Surgical Robot===== **Team Members:** Joseph Min, Zach Sabin\\ **Mentors:** Russell Taylor, Yunus Sevimli\\ **Project Pages:** [[:courses:446:2016:446-2016-09:Project 09 Main Page | Project 09 Main Page]] =====Project 10: Real Time Motion Reflexes for Robotic Hip Surgery===== **Team Members:** Kevin Yee, Kangsan Kim\\ **Mentors:** Andrew Hundt, Peter Kazanzides\\ **Project Pages:** [[:courses:446:2016:446-2016-10:Project 10 Main Page | Project 10 Main Page]] =====Project 11: Project ReHap===== **Team Members:** David West\\ **Mentors:** Gorkem Sevinc, Krishnaj Gourab\\ **Project Pages:** [[:courses:446:2016:446-2016-11:Project 11 Main Page | Project 11 Main Page]] =====Project 12: Validating and Improving Single-Stage Cranioplasty Prosthetics with Ground Truth Models===== **Team Members:** Erica Schwarz, Willis Wang\\ **Mentors:** Mehran Armand, Ryan Murphy, Chad Gordon\\ **Project Pages:** [[:courses:446:2016:446-2016-12:Project 12 Main Page | Project 12 Main Page]] =====Project 13: Software-based Approach for Real-time Photoacoustic Imaging using Vendor Independent US Beamformed Data===== **Team Members:** Howard Huang\\ **Mentors:** Kai Zhang, Emad Boctor\\ **Project Pages:** [[:courses:446:2016:446-2016-13:Project 13 Main Page | Project 13 Main Page]] =====Project 14: Towards correlation of clinical outcomes with radiation therapy dose distributions===== **Team Members:** Pranav Lakshminarayanan, Alex Matthews\\ **Mentors:** Russell Taylor, Todd McNutt\\ **Project Pages:** [[:courses:446:2016:446-2016-14:Project 14 Main Page | Project 14 Main Page]] =====Project 15: Mouse Segmentation and Optical Properties for BLT===== **Team Members:** Alan Cham\\ **Mentors:** Ken Wang, Bin Zhang, Junghoon Lee\\ **Project Pages:** [[:courses:446:2016:446-2016-15:Project 15 Main Page | Project 15 Main Page]] =====Project 16: Browser based constructive solid geometry for anatomical models===== **Team Members:** Nicole Ortega, Vikram Chandrashekhar\\ **Mentors:** Alex Matthews, Param Shah\\ **Project Pages:** [[:courses:446:2016:446-2016-16:Project 16 Main Page | Project 16 Main Page]] =====Project 17: Robotic Ultrasound Needle Placement and Tracking===== **Team Members:** Christopher Hunt, Matthew Walmer\\ **Mentors:** Risto Kojcev, Bernhard Fuerst, Javad Fatouhi, Nassir Navab\\ **Project Pages:** [[:courses:446:2016:446-2016-17:Project 17 Main Page | Project 17 Main Page]] =====Project 18: Software control of cranial implant laser cutting machine===== **Team Members:** Jerry Fang, Joshua Liu\\ **Mentors:** Mehran Armand\\ **Project Pages:** [[:courses:446:2016:446-2016-18:Project 18 Main Page | Project 18 Main Page]] =====X: Project Template===== **Team Members:** Name 1, Name 2\\ **Mentors:** Name 1, Name 2\\ **Project Pages:** [[:courses:446:2016:446-2016-X:Project Template | Project Name]]