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courses:446:2013:446-2013-1:ultrasound_imaging_of_brain_shunts [2013/05/06 16:14]
rhan3@johnshopkins.edu [Milestones and Status]
courses:446:2013:446-2013-1:ultrasound_imaging_of_brain_shunts [2013/05/14 15:34] (current)
yhong21@johnshopkins.edu [Other Resources and Project Files]
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 ======Deliverables====== ======Deliverables======
    
-  * **Minimum:** (03/26/2013)+  * **Minimum:** (03/26/2013) --Achieved
     - An ultrasound friendly brain phantom is designed and built, with shunts inserted.      - An ultrasound friendly brain phantom is designed and built, with shunts inserted. 
-    - Laser and US system is tested preliminarily for PA signal detection with tissue-like material. -- Done +    - Laser and US system is tested preliminarily for PA signal detection with tissue-like material. 
-    - Experiment data is collected and processed without skull to form delayed images. --Done +    - Experiment data is collected and processed without skull to form delayed images. 
-    - Experiments with different distance between the end of fiber and the occlusion is conducted. --Working on +    - Experiments with different distance between the end of fiber and the occlusion is conducted.
-    - More to be added and updated+
  
-  * **Expected:** (04/20/2013) +  * **Expected:** (04/20/2013) --Achieved 
-    - Experiment data with skull is collected and processed. +    - Experiment data with skull is collected and processed. Pig pelvis bone is used.
     - Different levels of occlusion can be recognized from the image.      - Different levels of occlusion can be recognized from the image. 
-    - Shunts, tissues and fluid will be able to distinguish. +    - <del>Shunts, tissues and fluid will be able to distinguish.</del> -- They are all nearly transparent with the ultrasound.
-    More to be added and updated+
  
-  * **Maximum:** (05/10/2013) +  * **Maximum:** (05/10/2013) --Achieved 
-    Faster image processing method is developed. +    - <del>Real-time imaging through the skull for occlusion and shunts is achieved.</del> Changed to delayed imaging due to limitation of the data collecting and processing time of the hardware(DAQ).  
-    - Real-time imaging through the skull for occlusion and shunts is achieved.  +    - <del>Monitor the clearing procedure of the shunt.</del> Changed to the visualization of the approaching process of the fiber end point to occlusion, and the accumulation process of the occlusion. 
-    - Monitor the surgery procedure of clearing the shunt. +(Version 3)
-    - More to be addd and updated +
-(Version 1)+
 ======Technical Approach====== ======Technical Approach======
 \\ \\
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   * Project Checkpoint   * Project Checkpoint
     * {{:courses:446:2013:446-2013-1:checkpoint_presentation.pdf| Project checkpoint presentation}}     * {{:courses:446:2013:446-2013-1:checkpoint_presentation.pdf| Project checkpoint presentation}}
 +    * {{:courses:446:2013:446-2013-1:quick_checkpoint_presentation.pdf| Project quick checkpoint presentation}}
   * Paper Seminar Presentations   * Paper Seminar Presentations
     * Yang Hong     * Yang Hong
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         * {{:courses:446:2013:446-2013-1:Paper2_han.pdf| Paper II}}         * {{:courses:446:2013:446-2013-1:Paper2_han.pdf| Paper II}}
   * Project Final Presentation   * Project Final Presentation
-    * {{:courses:446:2013:446-2013-X:final_poster_pdf.pdf|PDF of Poster}}+    * {{:courses:446:2013:446-2013-1:final_project_poster.pdf|PDF of Poster}}
   * Project Final Report   * Project Final Report
-    * {{:courses:446:2013:446-2013-X:final_report.pdf|Final Report}}+    * {{:courses:446:2013:446-2013-1:final_report_v2.pdf|Final Report}}
     * links to any appendices or other material     * links to any appendices or other material
 ======Project Bibliography======= ======Project Bibliography=======
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 [2]. Fre ́ de ́ ric Bevilacqua, Dominique Piguet, Pierre Marquet, Jeffrey D. Gross, Bruce J. Tromberg, and Christian Depeursinge: In vivo local determination of tissue optical properties: applications to human brain. 1 August 1999/ Vol.38, No.22/ Applied Optics.\\ [2]. Fre ́ de ́ ric Bevilacqua, Dominique Piguet, Pierre Marquet, Jeffrey D. Gross, Bruce J. Tromberg, and Christian Depeursinge: In vivo local determination of tissue optical properties: applications to human brain. 1 August 1999/ Vol.38, No.22/ Applied Optics.\\
 [3]. Matteo Gatto, Gianluca Memoli, Adam Shaw, Neelaksh Sadhooo, Pierre Gelat, Russell A. Harris, Three-Dimensional Prinrting (3DP) of neonatal head phantom for ultrasound: Thermocouple embedding and simulation of bone, Medical Engineering &Physics 34 (2012) 929-937.\\ [3]. Matteo Gatto, Gianluca Memoli, Adam Shaw, Neelaksh Sadhooo, Pierre Gelat, Russell A. Harris, Three-Dimensional Prinrting (3DP) of neonatal head phantom for ultrasound: Thermocouple embedding and simulation of bone, Medical Engineering &Physics 34 (2012) 929-937.\\
 +[4]. Limng Nie, Xin Cai, Konstantin Maslov,  Alejandro Garcia-Uribe, Mark A.  Anastasio, Lihong V. Wang, “Photoacoustic tomography through a whole adult human skull with a photon recycler”, Washington University, Department of Biomedical Engineering, St. Louis, Missouri 63130.\\
 +[5]. H. J. Kang et al., “Software framework of a real-time pre-beam-formed RF data acquisition of an ultrasound research scanner,” Proc. SPIE 8320, 83201F (2012).\\
 +[6]. N. Kuo, H.J. Kang, D.Y. Song, J.U. Kang, E.M. Boctor, "Real-time Photoacoustic Imaging of Prostate Brachytherapy Seeds Using a Clinical Ultrasound System", Journal of Biomedical Optics, 17(6), June 2012.\\
 +[7]. P. J. Stolka,  H.-J. Kang,  and M. B. Emad, “The MUSiiC toolkit:  Modular Real-Time Toolkit for Advanced Ultrasound Research,” MIDAS Journal, (2010)\\
 +[8]. H.-J. Kang, P. J. Stolka, and M.B.Emad, “OpenITGLinkMUSiiC toolkit: A Standard Communications Protocol for Advanced Ultrasound Research,” MIDAS Journal, (2010)\\
 +[9]. M. Fink, “Time reversal of ultrasonic fields-Part I: Basic principles”. IEEE Trans. Sonics Ultrason. 39(5), 555–566 (1992).\\
 +[10]. J.-L. Robert, M. Burcher, C. Cohen-Bacrie, and M.Fink, “Time reversal operator decomposition with focused transmission and robustness to speckle noise: Application to microcalcification detection”. J. Acoust. Soc. Am., 119:3848-3859 (2006).
 +
  
  
 ======Other Resources and Project Files====== ======Other Resources and Project Files======
-Here give list of other project files (e.g., source code) associated with the project.  If these are online give a link to an appropriate external repository or to uploaded media files under this name space.+* Project MATLAB beamforming code 
 +    * {{:courses:446:2013:446-2013-1:matlab.zip| MATLAB beam-forming code}} 
courses/446/2013/446-2013-1/ultrasound_imaging_of_brain_shunts.1367871258.txt.gz · Last modified: 2013/05/06 16:14 by rhan3@johnshopkins.edu




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