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CiiS Lab
Johns Hopkins University
112 Hackerman Hall
3400 N. Charles Street
Baltimore, MD 21218
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Russell Taylor
127 Hackerman Hall
rht@jhu.edu

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courses:456:2023:projects [2023/05/01 20:42] – [Resources] jbarrag3courses:456:2023:projects [2024/01/01 21:24] – [Resources] rtaylor2
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-======CIS Spring 2023 Projects======+======CIS Spring 2024 Projects======
 ~~NOTOC~~ ~~NOTOC~~
 =====To CIS II Students: Project Ideas===== =====To CIS II Students: Project Ideas=====
  
-Here is a [[:courses:456:2023:projects:ideas:456-2023-possible-projects | list of the project ideas and each individual set of slides]] for 2023.  These will be presented in class over the first few sessions of class.+Here is a [[:courses:456:2024:projects:ideas:456-2024-possible-projects | list of the project ideas and each individual set of slides]] for 2024.  These will be presented in class over the first few sessions of class.
  
 Remember several points, however: Remember several points, however:
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   * **{{:courses:456:cis_ii_project_template.pptx|Project ideas template}}**   * **{{:courses:456:cis_ii_project_template.pptx|Project ideas template}}**
-  * [[ :courses:456:examples:example_ideas |Example project idea slides from previous years ]]+  * **[[ :courses:456:examples:example_ideas |Example project idea slides from previous years ]]**
  
  
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 =====Resources===== =====Resources=====
   * **Google Cloud Credits:** Some projects (especially those involving machine learning) many require significant computing resources.  We have obtained a small Google Cloud Platform Education Grant to help support these projects.  See the TA if you need a coupon.   * **Google Cloud Credits:** Some projects (especially those involving machine learning) many require significant computing resources.  We have obtained a small Google Cloud Platform Education Grant to help support these projects.  See the TA if you need a coupon.
-  * **{{ :courses:456:2023:sample_background_reading_presentation_2022.pdf |Sample background reading presentation from 2022}}** +  * **{{ :courses:456:2022:sample_background_reading_presentation_2022.pdf |Sample background reading presentation from 2022}}** 
-  * **{{ :courses:456:2023:sample_background_reading_report_2022.pdf |Sample background reading report from 2022}}** +  * **{{ :courses:456:2022:sample_background_reading_report_2022.pdf |Sample background reading report from 2022}}** 
-  * **{{ :courses:456:2023:cisii_poster_template2023.pptx | Poster template final exam 2023}}**+  * **{{ :courses:456:2024:cisii_poster_template2024.pptx | Poster template final exam 2024}}** 
 +  * **[[https://forms.gle/h8gydHdvT7rR9yKb9|Best project selection form - poster session 2024]]:** Follow this link to vote for the best project during the poster session.
  
 =====Nondisclosure agreement for in-class discussion===== =====Nondisclosure agreement for in-class discussion=====
 As we discussed in class, some of the projects may contain potentially patentable material or other material that should not be disclosed publicly until a later time.  In order to permit free in-class discussion of this material, we have developed a non-disclosure agreement. When asked, the entire class agreed to sign such an agreement, a copy of which is linked below.   As we discussed in class, some of the projects may contain potentially patentable material or other material that should not be disclosed publicly until a later time.  In order to permit free in-class discussion of this material, we have developed a non-disclosure agreement. When asked, the entire class agreed to sign such an agreement, a copy of which is linked below.  
  
-  * {{ :courses:456:2023:2023_nda_for_in-class_discussions_-_jan_24_2023.pdf|Here is a link to current year's agreement}}.+  * {{ :courses:456:2024:2024_nda_for_in-class_discussions_-_jan_24_2024.pdf|Here is a link to current year's agreement}}.
   * If **any** member of the class has any reservations about this, please inform us immediately.   * If **any** member of the class has any reservations about this, please inform us immediately.
   * Also, class members are reminded to identify potentially confidential material on any slides or other presentation material used in class   * Also, class members are reminded to identify potentially confidential material on any slides or other presentation material used in class
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   * If your name has been highlighted, it means your project has been created on the wiki page and you can start to edit it.   * If your name has been highlighted, it means your project has been created on the wiki page and you can start to edit it.
  
 +=====01: Project Name=====
 +**Team Members:** Names\\
 +**Mentors:** Names\\
 +**Project Pages:** [[:courses:456:2024:projects:456-2024-01:Project-01 | Project 01 Name]]
  
-======Projects for 2023====== +=====02: Project Name===== 
-**[[:courses:456:2023:Schedule|Follow this link for CIS II Spring 2023 class schedule]]** +**Team Members:** Names\\ 
-=====01: Transparency Optimization of the Galen Surgical System with Frequency Domain Admittance Controller Design===== +**Mentors:** Names\\ 
-**Team Members:** Brevin Banks\\ +**Project Pages:** [[:courses:456:2024:projects:456-2024-02:Project-02 | Project 02 Name]]
-**Mentors:** Ugur Tumerdem, Manish Sahu, Adnan Munawar, Mohammad Salehizadeh, Russell Taylor\\ +
-**Project Pages:** [[:courses:456:2023:projects:456-2023-01:Project-01 | Transparency Optimization of the Galen Surgical System with Frequency Domain Admittance Controller Design]]+
  
-=====02: Continuum Microgripper Modelling for Retinal Surgery ===== +=====03: Project Name===== 
-**Team Members:** Shuyuan Wang \\ +**Team Members:** Names\\ 
-**Mentors:** David Usevitch, Prof. Iulian Iordachita\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-02:Project-02 | Continuum Microgripper Modelling for Retinal Surgery]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-03:Project-03 | Project 03 Name]]
  
-=====03: Quality assurance of radiotherapy treatment using scattered x-ray===== +=====04: Project Name===== 
-**Team Members:** Samuel Ydenberg, Tatiana Kashtanova \\ +**Team Members:** Names\\ 
-**Mentors:** Xun Jia, Lin Su\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-03:Project-03 | Quality assurance of radiotherapy treatment using scattered x-ray]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-04:Project-04 | Project 04 Name]]
  
-=====04: Vision Guided Mosquito Dissection for the Production of Malaria Vaccine===== +=====05: Project Name===== 
-**Team Members:** Yutai Wang\\ +**Team Members:** Names\\ 
-**Mentors:** Balazs Vagvolgyi \\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-04:Project-04 | Vision Guided Mosquito Dissection for the Production of Malaria Vaccine]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-05:Project-05 | Project 05 Name]]
  
-=====05: Recreating Pelvic Trauma Surgery in Virtual Reality for the Development of Novel C-arm Interfaces===== +=====06: Project Name===== 
-**Team Members:** Han Zhang, Zixuan Liu, Liam Wang\\ +**Team Members:** Names\\ 
-**Mentors:** Benjamin Killeen, Prof. Mathias Unberath\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-05:Project-05 | Recreating Pelvic Trauma Surgery in Virtual Reality for the Development of Novel C-arm Interfaces]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-06:Project-06 | Project 06 Name]]
  
-=====06: 3D Reconstruction of Inner Ear from Histopathology===== +=====07: Project Name===== 
-**Team +**Team Members:** Names\\ 
-Members:** Aseem Jain\\ +**Mentors:** Names\\ 
-**Mentors:** Dr. Creighton, Dr. Lauer, Dr. Ward\\ +**Project Pages:** [[:courses:456:2024:projects:456-2024-07:Project-07 | Project 07 Name]]
-**Project Pages:** [[:courses:456:2023:projects:456-2023-06:Project-06 |  3D Reconstruction of Inner Ear from Histopathology]]+
  
-=====07: Real-time Integration of 2D-3D Pelvic Registration with Robotic X-ray Acquisition===== +=====08: Project Name===== 
-**Team Members:** Jiaming Zhang, Zhangcong She\\ +**Team Members:** Names\\ 
-**Mentors:** Benjamin Killeen, Prof. Mathias Unberath\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-07:Project-07 | Real-time Integration of 2D-3D Pelvic Registration with Robotic X-ray Acquisition]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-08:Project-08 | Project 08 Name]]
  
-=====08: Automated Spinal Segmentation and Remote Monitor Calibration for Surgical Assessment===== +=====09: Project Name===== 
-**Team Members:** Jonathan Young, Arijit Nukala, Damiano Marsili\\ +**Team Members:** Names\\ 
-**Mentors:** Dr. Nicholas Theodore MD,Evan Haas & Antony Fuleihan,Dr. Youseph Yazdi, Drs.John Williams and Siri Khalsa\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-08:Project-08 | Automated Spinal Segmentation and Remote Monitor Calibration for Surgical Assessment]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-09:Project-09 | Project 09 Name]]
  
-=====09: Electromagnetic Tracking of Endovascular Catheters===== +=====10: Project Name===== 
-**Team Members:** Fangjie Li, Shanelle Cao, Huilin Xu\\ +**Team Members:** Names\\ 
-**Mentors:**  Dr. Ali Uneri & Dr. Fernando Gonzalez\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-09:Project-09 | Electromagnetic Tracking of Endovascular Catheters]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-10:Project-10 | Project 10 Name]]
  
-=====10: Design and Evaluation of Surgical Guidance Strategies for Continuum Manipulators===== +=====11: Project N11ame===== 
-**Team Members:** Nick Zhang\\ +**Team Members:** Names\\ 
-**Mentors:** Alejandro Martin-Gomez, Mehran Armand, Andreas Keller\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-10:Project-10 | Design and Evaluation of Surgical Guidance Strategies for Continuum Manipulators]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-11:Project-11 | Project 11 Name]]
  
-=====11: Autonomous Suture Managing for Robotic Suturing===== +=====12: Project Name===== 
-**Team Members:** Jiawei Liu , Nyeli Kratz, Nathan Van Damme\\ +**Team Members:** Names\\ 
-**Mentors:** Michael Kam\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-11:Project-11 | Autonomous Suture Managing for Robotic Suturing]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-12:Project-12 | Project 12 Name]]
  
-=====12: Evaluation of CT Registration for Image-Based Sinus Reconstruction===== +=====13: Project Name===== 
-**Team Members:** Jan Mangulabnan\\ +**Team Members:** Names\\ 
-**Mentors:** Roger Soberanis, Mathias Unberath\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-12:Project-12 | Evaluation of CT Registration for Image-Based Sinus Reconstruction]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-13:Project-13 | Project 13 Name]]
  
-=====13: Simulation Assisted Navigation for Head and Neck Surgery===== +=====14: Project Name===== 
-**Team Members:** Xinhao Chen, Zhaomeng Zhang\\ +**Team Members:** Names\\ 
-**Mentors:**  Dr. Adnan Munawar, Dr. Manish Sahu, Max Li, Mohammad Salehizadeh, Dr. Peter Kazanzides, Dr. Pete Creighton, Dr. Danielle Trakimas, Dr. Deepa Galaiya, Dr. Russ Taylor\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-13:Project-13 | Simulation Assisted Navigation for Head and Neck Surgery]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-14:Project-14 | Project 14 Name]]
  
-=====14: Improve Content Validity of Virtual Drilling Simulator===== +=====15: Project Name===== 
-**Team Members:** Anushruti Singh\\ +**Team Members:** Names\\ 
-**Mentors:** Hisashi Ishida,  Adnan Munawar,  Prof. Peter Kazanzides\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-14:Project-14 | Improve Content Validity of Virtual Drilling Simulator]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-15:Project-15 | Project 15 Name]]
  
-=====15: DaVinci-Assisted Continuum Robot Navigation and Manipulation===== +=====16: Project Name===== 
-**Team Members:**  Jaspor Jiang, Chenhan Zhang, Heyun Wang \\ +**Team Members:** Names\\ 
-**Mentors:** Mohammad Salehizadeh, Anton Deguet, Russell Taylor\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-15:Project-15 | DaVinci-Assisted Continuum Robot Navigation and Manipulation]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-16:Project-16 | Project 16 Name]]
  
-=====16: Deep learning continuum wire ===== +=====17: Project Name===== 
-**Team +**Team Members:** Names\\ 
-Members:** Zheyu Zhou, Wenxuan Li, Zheyuan Zhang\\ +**Mentors:** Names\\ 
-**Mentors:** David Usevitch, Iulian Iordachita\\ +**Project Pages:** [[:courses:456:2024:projects:456-2024-17:Project-17 | Project 17 Name]]
-**Project Pages:** [[:courses:456:2023:projects:456-2023-16:Project-16 | Deep learning continuum wire ]]+
  
-=====17: Automatic Calibration of force-sensing Instrument with FBG Sensors===== +=====18: Project Name===== 
-**Team Members:** Nili Abtahi\\ +**Team Members:** Names\\ 
-**Mentors:** Dr. Iulian Iordachita, Mojtaba Esfandiari\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-17:Project-17 | Automatic Calibration of force-sensing Instrument with FBG Sensors]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-18:Project-18 | Project 18 Name]]
  
-=====18: Dual-robotic arm prostate ultrasound tomography===== 
-**Team Members:** Zhenghao Li, Ziyi Wang, Yunpu Zhang\\ 
-**Mentors:** Yixuan Wu, Dr. Mohammad Salehizadeh, Dr. Russ Taylor, Dr. Emad Boctor \\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-18:Project-18 | Dual-robotic arm prostate ultrasound tomography]] 
  
-=====19: VR Drilling Simulator for Mastoidectomy===== +=====19: Project Name===== 
-**Team Members:** Jonathan Wang, Kesavan Venkatesh, Yi Wang\\ +**Team Members:** Names\\ 
-**Mentors:** David Usevitch, Hisashi Ishida\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-19:Project-19 | VR Drilling Simulator for Mastoidectomy]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-19:Project-19 | Project 19 Name]]
  
-=====20: A reinforcement learning approach to robotic suturing===== +=====20: Project Name===== 
-**Team Members:** Jocelyn Hsu, Jihoon Kim, Walee Attia\\ +**Team Members:** Names\\ 
-**Mentors:** Anqi Liu, Adnan Munawar, Manish Sahu, Peter Kazanzides\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-20:Project-20 | A reinforcement learning approach to robotic suturing]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-20:Project-20 | Project 20 Name]]
  
-=====21: Tele-operation Control of a High Dexterity Robot for Vitreoretinal Surgery===== +=====21: Project Name===== 
-**Team Members:** Xiao Wei\\ +**Team Members:** Names\\ 
-**Mentors:** Mojtaba Esfandiari, Dr. Adnan Munawar, Prof. Ugur Tumerdem, Prof. Iulian Iordachita\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-21:Project-21 | Tele-operation Control of a High Dexterity Robot for Vitreoretinal Surgery]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-21:Project-21 | Project 21 Name]]
  
-=====22: Ultrasound-Guided Robotic Central Line Placement===== +=====22: Project Name===== 
-**Team Members:** Xuanning Liu, Kesi Liang, Pranathi Golla\\ +**Team Members:** Names\\ 
-**Mentors:** Dr. Axel Krieger, Lidia Al-Zogbi, Dr. Vinciya Pandian, Dr. Mathias Unberath\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-22:Project-22 | Ultrasound-Guided Robotic Central Line Placement]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-22:Project-22 | Project 22 Name]]
  
-=====23: Creation Of A Novel Real-time Communication Solution For Timely Sepsis Management===== +=====23: Project Name===== 
-**Team Members:** Sofia Posada, Rahul Swaminathan \\ +**Team Members:** Names\\ 
-**Mentors:** Jim Fackler\\ +**Mentors:** Names\\ 
-**Project Pages:** [[:courses:456:2023:projects:456-2023-23:Project-23 | Creation Of A Novel Real-time Communication Solution For Timely Sepsis Management]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-23:Project-23 | Project 23 Name]]
  
 =====24: Project Name===== =====24: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-24:Project-24 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-24:Project-24 | Project Name]]
  
 =====25: Project Name===== =====25: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-25:Project-25 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-25:Project-25 | Project Name]]
  
 =====26: Project Name===== =====26: Project Name=====
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 Members:** Names\\ Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-26:Project-26 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-26:Project-26 | Project Name]]
  
 =====27: Project Name===== =====27: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-27:Project-27 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-27:Project-27 | Project Name]]
  
 =====28: Project Name===== =====28: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-28:Project-28 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-28:Project-28 | Project Name]]
  
 =====29: Project Name===== =====29: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-29:Project-29 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-29:Project-29 | Project Name]]
  
 =====30: Project Name===== =====30: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-30:Project-30 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-30:Project-30 | Project Name]]
  
 =====31: Project Name===== =====31: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-31:Project-31 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-31:Project-31 | Project Name]]
  
 =====32: Project Name===== =====32: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-32:Project-32 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-32:Project-32 | Project Name]]
  
 =====33: Project Name===== =====33: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-33:Project-33 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-33:Project-33 | Project Name]]
  
 =====34: Project Name===== =====34: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-34:Project-34 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-34:Project-34 | Project Name]]
  
 =====35: Project Name ===== =====35: Project Name =====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-35:Project-35 | Project Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-35:Project-35 | Project Name]]
  
 =====99: Project Name===== =====99: Project Name=====
 **Team Members:** Names\\ **Team Members:** Names\\
 **Mentors:** Names\\ **Mentors:** Names\\
-**Project Pages:** [[:courses:456:2023:projects:456-2023-99:Project-99 | Project 99 Name]]+**Project Pages:** [[:courses:456:2024:projects:456-2024-99:Project-99 | Project 99 Name]]
  
courses/456/2023/projects.txt · Last modified: 2024/01/05 15:17 by rtaylor2




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