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courses:455-655:2025:fall-2025-schedule [2025/08/05 18:09] rtaylor2courses:455-655:2025:fall-2025-schedule [2025/08/11 18:13] (current) – [Week 4] rtaylor2
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 =====Week 1===== =====Week 1=====
   *August 26   *August 26
-    * {{ :courses:455-655:2024:2024_cis_i_organization.pdf |Fall 2024 Organization Lecture}}+    * {{ :courses:455-655:2025:2025_cis_i_organization.pdf |Fall 2025 Organization Lecture}}
     * {{ :courses:455-655:2024:2024_introductory_lecture.pdf |CIS I Introductory Lecture}}     * {{ :courses:455-655:2024:2024_introductory_lecture.pdf |CIS I Introductory Lecture}}
   * August 28   * August 28
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 =====Week 4===== =====Week 4=====
-  * September 17+  * September 16
     * Begin {{ :courses:455-655:lectures:calibration.pdf |Calibration}}      * Begin {{ :courses:455-655:lectures:calibration.pdf |Calibration}} 
       * {{ :courses:455-655:lectures:leastsquaresreview.pdf |Least Squares Review}} (if time)        * {{ :courses:455-655:lectures:leastsquaresreview.pdf |Least Squares Review}} (if time) 
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       * {{ :courses:455-655:lectures:interpolationreview.pdf |Interpolation Review}}       * {{ :courses:455-655:lectures:interpolationreview.pdf |Interpolation Review}}
       * [[https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.8.6623&rep=rep1&type=pdf|Paper on scattered point set interpolation]]        * [[https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.8.6623&rep=rep1&type=pdf|Paper on scattered point set interpolation]] 
-    * September 19 +    * September 18 
     * Finish{{ :courses:455-655:lectures:calibration.pdf |Calibration}}     * Finish{{ :courses:455-655:lectures:calibration.pdf |Calibration}}
       * {{ :courses:455-655:lectures:leastsquaresreview.pdf |Least Squares Review}}       * {{ :courses:455-655:lectures:leastsquaresreview.pdf |Least Squares Review}}
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         * {{ :courses:455-655:2024:pa_2_student_data.zip |Data for Programming Assignment #2}}         * {{ :courses:455-655:2024:pa_2_student_data.zip |Data for Programming Assignment #2}}
 =====Week 5===== =====Week 5=====
-  * September 24+  * September 23
     * Guest Lecture: TBD (Dr. Taylor at conference)     * Guest Lecture: TBD (Dr. Taylor at conference)
     * **Homework Assignment #1 Due**     * **Homework Assignment #1 Due**
-  * September 26 +  * September 25 (Dr. Taylor at conference) 
-    * Guest Lecture: TBD (Dr. Taylor at conference)+    * Guest Lecture: Dr. Francis Creighton  
 +      * Neurotology and lateral skull base surgery
 =====Week 6===== =====Week 6=====
   * September 30    * September 30 
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       * Guest lecture TBD or continue with Registration       * Guest lecture TBD or continue with Registration
 =====Week 8===== =====Week 8=====
-  * October 14 +  * October 13 
     * Finish {{ :courses:455-655:lectures:registration_part_2.pdf |Registration (Part 2)}}     * Finish {{ :courses:455-655:lectures:registration_part_2.pdf |Registration (Part 2)}}
       * {{ :courses:455-655:lectures:coherent_point_drift_registration.pdf |Coherent Point Drift Slides}}       * {{ :courses:455-655:lectures:coherent_point_drift_registration.pdf |Coherent Point Drift Slides}}
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         * [[https://en.wikipedia.org/wiki/Point_set_registration|Wikipedia article on point set registration]]         * [[https://en.wikipedia.org/wiki/Point_set_registration|Wikipedia article on point set registration]]
         * {{ :courses:455-655:lectures:defense_presentation_cong_gao_-_handouts.pdf |Fluoroscopic Navigation for Robot-Assisted Orthopedic Surgery (Cong Gao)}}            * {{ :courses:455-655:lectures:defense_presentation_cong_gao_-_handouts.pdf |Fluoroscopic Navigation for Robot-Assisted Orthopedic Surgery (Cong Gao)}}   
-  * October 17+  * October 16
     * **WSE Fall Break - No class**     * **WSE Fall Break - No class**
 =====Week 9===== =====Week 9=====
-  * October 22+  * October 21
     * {{ :courses:455-655:lectures:registration_part_3.pdf |Registration (Part 3)}}     * {{ :courses:455-655:lectures:registration_part_3.pdf |Registration (Part 3)}}
       * Supplemental material       * Supplemental material
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         * [[https://www.cs.jhu.edu/cista/455/Lectures/AtlasValidation%20-%20Chintalapani%202010.pptx.pdf|Statistical Atlas Validation (G. Chintalapani)]]         * [[https://www.cs.jhu.edu/cista/455/Lectures/AtlasValidation%20-%20Chintalapani%202010.pptx.pdf|Statistical Atlas Validation (G. Chintalapani)]]
         * [[https://www.cs.jhu.edu/cista/455/Lectures/Miccai_2011_TALK_Sharmi.pdf|Improving mesh vertices (S. Seshamani)]]         * [[https://www.cs.jhu.edu/cista/455/Lectures/Miccai_2011_TALK_Sharmi.pdf|Improving mesh vertices (S. Seshamani)]]
-  * October 24 +  * October 23 
-    * **Hand out {{ :courses:455-655:2024:programming_3_and_4_600-445-2024.pdf |Programming Assignments #3 and #4}}** +    * **Hand out Programming Assignments #3 and #4}}** 
-      * {{ :courses:455-655:2024:2024_pa345_student_data.zip |Programming Assignments 3, 4, and 5 Data}}+      * Programming Assignments 3, 4, and 5 Data}
     * Finish {{ :courses:455-655:lectures:registration_part_3.pdf |Registration (Part 3)}}     * Finish {{ :courses:455-655:lectures:registration_part_3.pdf |Registration (Part 3)}}
       * Supplemental material       * Supplemental material
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   * October 29   * October 29
     * **Homework 2 Due**     * **Homework 2 Due**
-    * Guest lecture from Prof. Emad Boctor     
- 
-  * October 31 
     * Finish{{ :courses:455-655:lectures:medical_robots_part_1.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 1)}}         * Finish{{ :courses:455-655:lectures:medical_robots_part_1.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 1)}}    
     * Begin {{ :courses:455-655:lectures:medical_robots_part_2.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 2)}}     * Begin {{ :courses:455-655:lectures:medical_robots_part_2.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 2)}}
       * Supplemental Material: {{ :courses:455-655:lectures:max_li_iros_2020_presentation.pdf |Anatomical Mesh-Based Virtual Fixtures for Surgical Robots}}       * Supplemental Material: {{ :courses:455-655:lectures:max_li_iros_2020_presentation.pdf |Anatomical Mesh-Based Virtual Fixtures for Surgical Robots}}
-=====Week 11===== + 
-  * November 5 +  * October 31
-    * **Programming Assignment #2 due** +
-    * Hand out **{{ :courses:455-655:2024:homework_3_600-455-2024.pdf |Homework Assignment #3}}**+
     * Finish {{ :courses:455-655:lectures:medical_robots_part_2.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 2)}}     * Finish {{ :courses:455-655:lectures:medical_robots_part_2.pdf |Medical Robotics, Constrained Control and Virtual Fixtures (Part 2)}}
       * Supplemental Material: {{ :courses:455-655:lectures:max_li_iros_2020_presentation.pdf |Anatomical Mesh-Based Virtual Fixtures for Surgical Robots}}       * Supplemental Material: {{ :courses:455-655:lectures:max_li_iros_2020_presentation.pdf |Anatomical Mesh-Based Virtual Fixtures for Surgical Robots}}
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       * {{ :courses:455-655:lectures:tx-stable-us-spie.pdf |Slides from SPIE talk on stabilized ultrasound imaging}}       * {{ :courses:455-655:lectures:tx-stable-us-spie.pdf |Slides from SPIE talk on stabilized ultrasound imaging}}
  
-  * November 7 +=====Week 11===== 
-     * Finish {{ :courses:455-655:lectures:medical_robots_part_3_-_autonomy.pdf |Human-Machine Partnerships in Surgical Robot Systems}}+  * November 
 +    * **Programming Assignment #2 due** 
 +    * Hand out Homework Assignment #3 
 +    * Finish {{ :courses:455-655:lectures:medical_robots_part_3_-_autonomy.pdf |Human-Machine Partnerships in Surgical Robot Systems}}
       * [[ https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9805578 | R. H. Taylor, N. Simaan, A. Menciassi, and G. Z. Yang, "Surgical Robotics and Computer-Integrated Interventional Medicine", Proceedings of the IEEE, vol. 110- 7, pp. 823-834, 2022.]]        * [[ https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9805578 | R. H. Taylor, N. Simaan, A. Menciassi, and G. Z. Yang, "Surgical Robotics and Computer-Integrated Interventional Medicine", Proceedings of the IEEE, vol. 110- 7, pp. 823-834, 2022.]] 
       * [[ https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9805576| P. Fiorini, K. Y. Goldberg, Y. Liu, and R. H. Taylor, "Concepts and Trends in Autonomy for Robot-Assisted Surgery", Proceedings of the IEEE, vol. 110- 7, pp. 993-1011, 2022.]]       * [[ https://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9805576| P. Fiorini, K. Y. Goldberg, Y. Liu, and R. H. Taylor, "Concepts and Trends in Autonomy for Robot-Assisted Surgery", Proceedings of the IEEE, vol. 110- 7, pp. 993-1011, 2022.]]
       * [[ https://doi.org/10.1117/12.2550198 10.1117/12.2550198 | T. Xie, M. Shahbazi, Y. Wu, R. H. Taylor, and E. M. Boctor, "Stabilized ultrasound imaging of a moving object using 2D B-mode images and convolutional neural network", in Proc.SPIE, 2020.]]       * [[ https://doi.org/10.1117/12.2550198 10.1117/12.2550198 | T. Xie, M. Shahbazi, Y. Wu, R. H. Taylor, and E. M. Boctor, "Stabilized ultrasound imaging of a moving object using 2D B-mode images and convolutional neural network", in Proc.SPIE, 2020.]]
       * {{ :courses:455-655:lectures:tx-stable-us-spie.pdf |Slides from SPIE talk on stabilized ultrasound imaging}}       * {{ :courses:455-655:lectures:tx-stable-us-spie.pdf |Slides from SPIE talk on stabilized ultrasound imaging}}
 +  * November 6
  
-=====Week 12===== 
-  * November 12 
-    * Guest Lecture from Manish Sahu on robotic assistance for ENT surgery 
-  * November 14 
-    * **Programming Assignment #3 due** 
     * **Hand Out {{ :courses:455-655:2024:programming_5_600-445-2024.pdf |Optional Programming Assignment 5}}**     * **Hand Out {{ :courses:455-655:2024:programming_5_600-445-2024.pdf |Optional Programming Assignment 5}}**
       *{{ :courses:455-655:2023:pa5_notes.pdf | Notes for PA#5: Deformable Registration to a Statistical Shape Model}}       *{{ :courses:455-655:2023:pa5_notes.pdf | Notes for PA#5: Deformable Registration to a Statistical Shape Model}}
     * Case study: {{ :courses:455-655:lectures:craniofacial_surgery.pdf |Craniofacial osteotomies}}         * Case study: {{ :courses:455-655:lectures:craniofacial_surgery.pdf |Craniofacial osteotomies}}    
 +     * **Hand out Homework Assignment 4**
 +
 +=====Week 12=====
 +  * November 11
 +    * Guest Lecture TBD
 +    * Prof Taylor in Canada
 +  * November 14
 +    * Guest Lecture TBD
 +    * Prof Taylor in Canada
 +    * **Programming Assignment #3 due**
  
  
 =====Week 13===== =====Week 13=====
   * November 19    * November 19 
-    * Guest Lecture from Dr. Swaroop Vedula +    * Lecture TBD
-      * "What Can AI Teach a Surgeon"+
   * November 21   * November 21
      * **Homework Assignment 3 Due**      * **Homework Assignment 3 Due**
-     **{{ :courses:455-655:2024:homework_4_600-455-2024.pdf |Hand out Homework Assignment 4}}** +    * Lecture TBD 
-    * Guest Lecture from Prof. Iulian Iordachita + 
-      * {{ :courses:455-655:2024:autonomous_needle_insertions_iordachita_11_21_24_compact.pdf | Autonomous needle insertions}} +
 =====Week 14===== =====Week 14=====
  
-  * November 26 - **NO Class (Thanksgiving Week)** +  * November 25 - **NO Class (Thanksgiving Week)** 
-  * November 28 - **NO Class (Thanksgiving Week)**+  * November 27 - **NO Class (Thanksgiving Week)**
  
 =====Week 15===== =====Week 15=====
  
-  * December  +  * December  
-    * Guest Lecture from Prof. Todd McNutt (Prof. Taylor at Malone Center Symposium) +    * Lecture TBD 
-      {{ :courses:455-655:2024:taylor_2024.pdf | Radiotherapy}} +    * **Homework Assignment 4 Due*
-  * December 5+  * December 4
     * {{ :courses:455-655:lectures:therac.pdf |Safety Case Study: The Therac 25 Accidents}}      * {{ :courses:455-655:lectures:therac.pdf |Safety Case Study: The Therac 25 Accidents}} 
       * Background Material:       * Background Material:
         * [[https://web.stanford.edu/class/cs240/old/sp2014/readings/therac-25.pdf|Nancy Levenson and Clark Turner, "The Investigation of the Therac 25 Accidents", Computer 26(7) pp18-41]]         * [[https://web.stanford.edu/class/cs240/old/sp2014/readings/therac-25.pdf|Nancy Levenson and Clark Turner, "The Investigation of the Therac 25 Accidents", Computer 26(7) pp18-41]]
         * [[http://sunnyday.mit.edu/papers/therac.pdf|Therac-25 Accidents: An Updated Version of the Original Accident Investigation Paper (by Nancy Leveson)]] from Dr. Leveson's Book, [[http://sunnyday.mit.edu/book.html|Software, System Safety, and Computers]], Addison Wesley, 1995.         * [[http://sunnyday.mit.edu/papers/therac.pdf|Therac-25 Accidents: An Updated Version of the Original Accident Investigation Paper (by Nancy Leveson)]] from Dr. Leveson's Book, [[http://sunnyday.mit.edu/book.html|Software, System Safety, and Computers]], Addison Wesley, 1995.
-  * December 7 (Saturday) +    * **Programming Assignment 4 Due** 
-      * **Programming Assignment 4 Due (1:30PM)** +
-      * **Homework Assignment 4 Due (1:30PM)**+
  
 =====Optional Programming Assignment #5 ===== =====Optional Programming Assignment #5 =====
   * There will be no written final exam for CIS I.  Instead, there is an optional programming assignment that can be used to improve a student's grade.     * There will be no written final exam for CIS I.  Instead, there is an optional programming assignment that can be used to improve a student's grade.  
-  * The due date (subject to change) is **December 14 at 10:00PM**.+  * The due date (subject to change) is **December 13 at 10:00PM**.
   * If this due date conflicts with another final exam on the same date, then contact the TA. We will give an extension until the first day on which you do **not** have an exam, but no further.  We have very limited flexibility for this, since the assignments can require considerable time to grade.   * If this due date conflicts with another final exam on the same date, then contact the TA. We will give an extension until the first day on which you do **not** have an exam, but no further.  We have very limited flexibility for this, since the assignments can require considerable time to grade.
  
courses/455-655/2025/fall-2025-schedule.1754417358.txt.gz · Last modified: 2025/08/05 18:09 by rtaylor2




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