Advanced Computer-Integrated Surgery (CIS II)

CIS II (601.456/496/656/356) is a projects course for graduate students and upper-level undergrads, in which students work in teams of 1-3 on semester-long projects broadly related to computer-integrated interventions, AI in medicine, medical image analysis, or related topics. In addition to material covered in lectures/seminars by the instructor and other faculty, students are expected to read and provide critical analysis/presentations of selected papers in recitation sessions. Students taking this course are required to undertake and report on a significant term project under the supervision of the instructor and clinical end users. Grades are based both on the project and on classroom recitations. The only difference between the undergraduate versions (601.456/496) and the graduate version (601.656) of this course is the level of project undertaken. Typically, 601.656 projects require a greater degree of mathematical, image processing, or modeling background. Students wishing to attend the weekly lectures as a 1-credit seminar should sign up for 601.356.

  • Instructor: Russell H. Taylor (rht@jhu.edu)
  • Course number: 601.456/601.496/601.656/601.356 (formerly 600.446/646/346)
    • Note: 601.496 is identical to 601.456, except students must be members of a 3 person team. This option is provided for CS undergrads seeking to satisfy the “team” degree requirement.
  • Meeting times: Tuesdays and Thursdays 1:30-2:45
  • Meeting room:
    • Tuesdays and Thursdays: Hackerman Hall Room B17 (basement auditorium)
  • Prerequisite: CIS I or permission of instructor.
  • Piazza page (for communication): https://piazza.com/class/kjrnh4pc34z386
  • Teaching Assistant: Zhaoshuo (Max) Li
    • Email: zli122@jhu.edu
    • Office Address: Out in the ether somewhere
    • TA office Hours: By appointment

Projects in 2021

Projects in Prior Years

Schedule for Spring 2021

  • January 26
  • January 28
    • Presentation of project ideas
      • Chad Gordon, David Dreizin, Adam Toll, Swaroop Vedula, Deepa Galaiya, Peter Kazanzides
  • February 2
    • Presentation of project ideas
      • Lee Askt, Todd McNutt, Sheng Xu, Robin Yang, Reza Seifabadi, Ashely Antony, Ali Ebrahimi
  • February 4
    • Presentation of project ideas
      • Gang Li, Baichuan Jiang, Andy Ding, Jeremy Brown
  • February 9
    • Project 2 plan presentation - Justin Kim
    • Project 3 plan presentation - Zhuohong He
  • February 11
    • Project 1 plan presentation - Mark Shifman, Robby Waxman, Caroline Hoerrner
    • Project 8 plan presentation - Harsha Mohan, Seena Vafaee
    • Project 4 plan presentation - Andy Ding, Jessica Soong
  • February 16
    • Project 5 plan presentation - Nick Greene
    • Project 6 plan presentation - Kefan Song
  • February 18
    • Identification of projects and groups should be complete
    • Project 7 plan presentation - Yishun Zhou, Kaiyu Shi
    • Project 10 plan presentation - Ping-Cheng Ku
    • Project 11 plan presentation - Robert Huang
    • Project 12 plan presentation - Ruby Liu
  • February 23
    • Project 13 plan presentation - Hao Ding
    • Project 14 plan presentation - Giang Hoang
    • Project 15 plan presentation - David Shi, Tara Tang
    • Project 16 plan presentation - Henry Noren, Disha Mishra, Vivian Laam
  • February 25
    • All written project plans due. Wiki pages must all be complete (and continued to be updated after that)
      • Note that there will be a penalty assessed for late written plans
      • Note also that we will begin grading of Wiki pages
    • Project 09 plan presentation - Benjamin Albert, Chang Yan, Gary Yang
    • Project 17 plan presentation - Boyoung Zhao, Eric Han
    • Project 18 plan presentation - Tianyu Wang, Jiayin Qu
  • March 2
    • Paper Presentation
      • Justin Kim
      • Zhuohong He
      • Mark Shifman
  • March 4
    • Paper Presentation
      • Robby Waxman
      • Caroline Hoerrner
      • Harsha Mohan
  • March 9
    • Paper Presentation
      • Seena Vafaee
      • Andy Ding
      • Jessica Soong
  • March 11
    • Paper Presentation
      • Nick Greene
      • Kefan Song
      • Yishun Zhou
  • March 16
    • Project 16 checkpoint presentation - Henry Noren, Disha Mishra, Vivian Laam
    • Project 09 checkpoint presentation - Benjamin Albert, Chang Yan, Gary Yang
    • Project 17 checkpoint presentation - Boyoung Zhao, Eric Han
  • March 18
    • Project 18 checkpoint presentation - Tianyu Wang, Jiayin Qu
    • Project 12 checkpoint presentation - Ruby Liu
    • Project 13 checkpoint presentation - Hao Ding
  • March 23
    • Project 14 checkpoint presentation - Giang Hoang
    • Project 15 checkpoint presentation - David Shi, Tara Tang
    • Project 11 checkpoint presentation - Robert Huang
  • March 25
    • Project 2 checkpoint presentation - Justin Kim
    • Project 3 checkpoint presentation - Zhuohong He
    • Project 1 checkpoint presentation - Mark Shifman, Robby Waxman, Caroline Hoerrner
  • March 30
    • Project 8 checkpoint presentation - Harsha Mohan, Seena Vafaee
    • Project 4 checkpoint presentation - Andy Ding, Jessica Soong
    • Project 5 checkpoint presentation - Nick Greene
  • April 1
    • Project 6 checkpoint presentation - Kefan Song
    • Project 7 checkpoint presentation - Yishun Zhou, Kaiyu Shi
    • Project 10 checkpoint presentation - Ping-Cheng Ku
  • April 6
    • Paper Presentation
      • Disha Mishra
      • Vivian Laam
      • Benjamin Albert
  • April 8
    • Paper Presentation
      • Ruby Liu
      • Chang Yan
      • Gary Yang
  • April 13
    • Paper Presentation
      • Boyoung Zhao
      • Eric Han
      • Tianyu Wang
  • April 15
    • Paper Presentation
      • Jiayin Qu
      • Hao Ding
      • Giang Hoang
  • April 20
    • Paper Presentation
      • David Shi
      • Tara Tang
      • Henry Noren
  • April 22
    • Paper Presentation
      • Kaiyu Shi
      • Ping-Cheng Ku
      • Robert Huang
  • April 29 (last class)
    • Paper presentations, possible mini-checkpoints
  • May 6 (Final Exam Date)
    • Final presentations (6-9 PM EDT)
    • Final reports due at noon
courses/456.txt · Last modified: 2021/02/22 19:21 by rtaylor2




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